YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11077-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLKAYLKD GINVAAVMCL GDTISQFFFD KKSLDEWDAG RTLRFGIVGL VFVGPTLRRW  60
   61 YHFLESRVPK TYSPMRRGVT KMLVDQTLFA PPFTMAMSFL VPLSNGEPID RIRQRILDSY 120
  121 LSILVRNYML WPAAQMLNFR FVPLGYQVLY AQFIALVWNC YLSMILNS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.79
Transmembrane Helix	11	29	0.79
Non-Cytoplasmic	30	41	0.81
Transmembrane Helix	42	61	0.89
Cytoplasmic	62	81	0.85
Transmembrane Helix	82	103	0.79
Non-Cytoplasmic	104	143	0.75
Transmembrane Helix	144	162	0.85
Cytoplasmic	163	168	0.58