YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG2316-PF
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFLESKLS LAFRTRLVRH SYRLYFKNQN YYRVSNLDGR IENADHRLTE DISVFANSVA  60
   61 HLYSSLTKPC FDLMLIGLAL MRSSKKMKAN IITGPALSIG VIALTAHILR IVSPKFGQLV 120
  121 SEEANRYGYL RHIHSRIITN AEEIAFYGGH KVEMQQLRQA YNRLVNQMTT IFNQKLWFIM 180
  181 LEQFFMKYVW SGTGMIMVSL PILTGSDVGL GTVPNTAISE SRVSERTQYL TTARNLLISA 240
  241 ADAIERLMSS YKEIVSLAGY TFRVAGMMDV FEETALGVYC KTSVMESNQS NGIIEFRNGK 300
  301 PIAKGRIIYS DDPKNMSISL RAVPVVTPNC DIVVPKLTLC IEPGVHLLIT GPNGCGKSSL 360
  361 FRILSGLWPI YAGELHIPRP VKDVPCMFYI PQRPYMSIGS LCDQIIYPDT REDMKRKHIT 420
  421 ENELRSILKM VSLEHIAQRD SFDVVRDWKD ILSGGEKQRM AIARLFYHRP RYALLDECTS 480
  481 AVSIDVESSI YEIAKGMGIT LLTITHRPTL WKYHTHILEF DGLGNWQFRK MNSDEEQKGQ 540
  541 FLS

Type	Start	End	Confidence
Cytoplasmic	1	88	0.91
Transmembrane Helix	89	109	0.90
Non-Cytoplasmic	110	543	0.89