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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG32000-PD
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFASQSKACD SPSETVHLQS LPNHIEDLKF RNSDVETDDD LHFPGIAAKN KILKLSWWHS  60
   61 PVDMHYVATE SVQPKKSDKV PSNKIKKVEN NNTLVNGCSK TSARSVPLLK YNRPDQDGDS 120
  121 EENITSVLEP NVDEIYSKDS ERLVDDSKPC IGLLNPDQED QMKVCGYRRS LMRTGFCWAC 180
  181 IFLTGGLLRL VLHWWRHLYL YATCSQCSLE EAEQVLVTED YQGKHKMYHV KQIQVLTSSN 240
  241 LKTLLEKEQQ SIERTHIECD HVENVLQLSV HFTSAQFKKC SSIRIFRCKQ LVYAWNNNTN 300
  301 RFQRINGLDL NIPCSYYHQQ RGLPVHEQIS RRIVFGDNEI TVPLRDFKTL LFLEVLNPFY 360
  361 VFQLFSVILW FTYDYYYYAC VILLMSVFGI TVSVLQTKKN QDVLQKTVYN TGNAWVVDHK 420
  421 GLSKELPTRA IVPGDIIEIP SSGCTLHCDA ILISGNCILD ESMLTGESVP VTKTPLPSKR 480
  481 DMIFDKTEHA RHTLFCGTKV IQTRYIGSKK VLAFVINTGN ITAKGELIRS ILYPPPVDYK 540
  541 FEQDSYKFIQ FLAIIACVGF IYTLVTKILR GTDPVKIAVE SLDLITIVVP PALPAAMTVG 600
  601 RFYAQKRLKT SEIFCISPRS INVAGSINCC CFDKILKYSI LRERRERAIL AVTKKVSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle