YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RpL6-PB
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPIEKAKKV AKSAKKGKKH PVNSYLKGGI LRYSKAQMYK RRALYRLKDK KSPVVEKAKV  60
   61 PIKKVKKIGG PKNGGERTVF LKKSKASYPT KTFVKKRPSK ANFSEHKRNT RRNLTPGTVL 120
  121 ILLAGRHQGK RVVLLKVLAS GLLLVTGPFA LNSCPLRRVS QRYVIGTSSK VDLGAFKVPE 180
  181 HLNDAYFRRL KAKKDKKTGE ADIFAAKKER FVPNEQRKKD QKEVDAALLK VIKAHPEGKF 240
  241 FAKYLQNMFA LHSSQYPHRM RF

Type	Start	End	Confidence
Cytoplasmic	1	131	0.80
Transmembrane Helix	132	151	0.79
Non-Cytoplasmic	152	262	0.96