YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RpL6-PA
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPIEKAKKV AKSAKKGKKH PVNSYLKGGI LRYSKAQMYK RRALYRLKDK KSPVVEKAKV  60
   61 PIKKSKASYP TKTFVKKRPS KANFSEHKRN TRRNLTPGTV LILLAGRHQG KRVVLLKVLA 120
  121 SGLLLVTGPF ALNSCPLRRV SQRYVIGTSS KVDLGAFKVP EHLNDAYFRR LKAKKDKKTG 180
  181 EADIFAAKKE RFVPNEQRKK DQKEVDAALL KVIKAHPEGK FFAKYLQNMF ALHSSQYPHR 240
  241 MRF

Type	Start	End	Confidence
Cytoplasmic	1	112	0.82
Transmembrane Helix	113	132	0.81
Non-Cytoplasmic	133	243	0.96