YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31004-PB, CG31...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFKLFVVCA LACGFMAFVL ANENISTEEF EDQIINAVPE PVKVTKPKAQ AEFVEVPKAT  60
   61 PAPKKAEADN PKTKPLALQK PTLIPVVHVS SRGTDDILTV AGLKPEKMFG ALIMPNDYLG 120
  121 ELYDVDNSGY NWDPNNNVAP PTTYSTAAGG YTITAARLAE LRSNFMYWYF DKDMYGGRGD 180
  181 YQFDIHASMT QLHKNLNFQL PFYGFRFNYT RLSLNGYLEF SDPPEYLTYP LVFPIKDWPA 240
  241 KRDPSFMGIF FSKCRVGRIY PSDIDQRTPG VYFRVERDLM GRTDRFGVEV RERTMWDIRQ 300
  301 GVVGADTFIP KHVVIATWKN VSFAGGIDNS LYTTNTFQMV LATDEVYTYI IFNYAVLNWL 360
  361 SHTEAGGDTT KGEGGVPAYV GFNAGNGTQA YEYNPYSQNM VIRDLANRGW ANGFPGRHIF 420
  421 RVDEQILIGS CNKDIDAALL PLTFAPESGN MLGGQVVNIT GPCFDPAIRV TCHFDTESVL 480
  481 GTYVDRNRVI CVQPYLKAEG YIRFQISVGT QRFKWRGKYF VETPAAATEK IFFTTDDVHK 540
  541 KNPAEIRITW NQYNLTSNAN ANVMISLWGY RETKIEPQLE YIDVIEASYS NSGSYVITPS 600
  601 NYINRNNINR DMQFGFLQIN LTQPDQYSGL AISPVLWSRP IPLAWYMAPQ WERQHGKRWA 660
  661 RALCDNWIRA DRFLRNFAAD LPLCPCTLDQ AVLDKGRFRP DRECDKDSNP SCLRHRGAIH 720
  721 CVVSGTPVAQ GAEQQCCYDR YGFLMLTYDQ MWGSRPRRVH NLGKMPWNEA SKVPSLSMWF 780
  781 HDMRPFYSCC YWQEEQAVGC ETYRFERRPS QDCVAYQAPG IAGVFGDPHF VTFDGTAYTF 840
  841 NGLGEFVLAR SVDESNKFEV QGRFEQLPVN YYGEVKATQL TAVAMRGNTT TTIEVRLRPL 900
  901 HARWRYRLDV LADGRRVYFD RESLKFQHFD GVTVYTPTYL LNQSQVVVQF DAGIGVEVVE 960
  961 NEGYMTGRVF LPWKFINKTA GLFGNWSFNK LDDFMLPNGQ VAQLNLNDLR SIHTNFGIKW1020
 1021 MLTDREVPGV GAALFKREFG RMSGYYANAT FQPNYVLDPA DFLPANRSYD LERAEELCGE1080
 1081 CMQCQYDYAM TLNRDLAHFT KNYYDTIVNM QAENAVRVVS CGVLQTPRFG RKLSFDFMPG1140
 1141 AKVSFECNEG FILIGDQRRE CLSNGLWNIP EYGYTECLRE VYYTRRVAFI AIGIIFLVIC1200
 1201 PLMLCIVCGV YRYRQKQLKE DPQWQMPMLP RSRASSARNL RTLNYDDDSD TDASTLKKTK1260
 1261 KWDLDENDED VTSSEGEKPK QLGRRSLHSA SGTELDQHGS PVDGDHPDED DDFDEADVHT1320
 1321 GTTHPVGYHQ PLSPEEADQL HRQQYSPTFS GLDSRTSGAS SINYTPQAAT QNRFGGVPVL1380
 1381 PSNTQYYSRP PSSVNTVPLR TAPTPLTQDT GLPSPPLATS PTPSVQKSTE V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle