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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ptx1-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSSAVGGC GGGGGLGVGV VTSSATALGP GGLTNGGGGV VSGALNGLEA MSAESTGLCL  60
   61 QDLVSAGTAN GAGSAGSAES ATTTSTALSS GSTGSSTVNG GGSSTSGTEH LHSHHSLHDS 120
  121 SSSVSISPAI SSLMPISSLS HLHHSAGQDL VGGYSQHPHH TVVPPHTPKH EPLEKLRIWA 180
  181 ETGDFRDSHS SMTAVANSLD STHLNNFQTS STSSISNRSR DRKDGNRSVN ETTIKTENIS 240
  241 SSGHDEPMTT SGEEPKNDKK NKRQRRQRTH FTSQQLQELE HTFSRNRYPD MSTREEIAMW 300
  301 TNLTEARVRV WFKNRRAKWR KRERNAMNAA VAAADFKSGF GTQFMQPFAD DSLYSSYPYN 360
  361 NWTKVPSPLG TKPFPWPVNP LGSMVAGNHH QNSVNCFNTG ASGVAVSMNN ASMLPGSMGS 420
  421 SLSNTSNVGA VGAPCPYTTP ANPYMYRSAA EPCMSSSMSS SIATLRLKAK QHASAGFGSP 480
  481 YSAPSPVSRS NSAGLSACQY TGVGVTDVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle