YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15531-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTKVKEPD QSGDSIHKKR DAIWPLVLFY IHLNILGVYG IYVLLTSASW ATILFTALLT  60
   61 LLGTLGVTVG VHRLWAHRTF TASKPLKVFL MFCQTTAGQG SIYSVVQAHR LHHAKFQQDE 120
  121 DPYYSKHSFM YAQVRGGLLK YSPQQEELLK DVDMSDLESD PVVMFQKRFY VLLYIFLNVL 180
  181 LSVNTPFQYF GDSLATSMFV GFWLRSLIVI NLGNLVHSSH FIWSIHKGFK PTDSNSIFLI 240
  241 TKSYWPQYHY LLPRDYQSGE YGNYASGIGS SMIRVFAALD WAKDLKTIGS VAVRQGLTKA 300
  301 VETGRPIVEC IEEQVELEEN ALPANHFLNR EKFM

Type	Start	End	Confidence
Cytoplasmic	1	21	0.98
Transmembrane Helix	22	45	0.86
Non-Cytoplasmic	46	52	0.71
Transmembrane Helix	53	75	0.91
Cytoplasmic	76	168	0.94
Transmembrane Helix	169	190	0.87
Non-Cytoplasmic	191	198	0.77
Transmembrane Helix	199	221	0.81
Cytoplasmic	222	334	0.92