YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0292151, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNSSFFDE HIAMIYSNLM DQYMPEYFKS FEYTPWVFSL LGSVVIGLSG IFPLIIIPTE  60
   61 EKMAKEGYKD PADSKLLRVL LSFAVGGLLG DVFLHLLPEA WEGDNQDPSS HPSLRSGLWV 120
  121 LSGILIFTIV EKIFSGYASA DEENPQPKCV EIANCLLRRH GGQLPEGETS ESCGGACDIE 180
  181 DVGKVCFLRE QEQKSKERKE QPKKVAGYLN LLANSIDNFT HGLAVAGSFL VSFRHGILAT 240
  241 FAILLHEIPH EVGDFAILLR SGFSRWDAAR AQLLTAGAGL LGALVAIGGS GVTSAMEART 300
  301 SWIMPFTAGG FLHIALVTVL PDLLKEEERK ESIKQLLALV FGIALMAVMT MLFEH

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.92
Transmembrane Helix	36	57	0.95
Cytoplasmic	58	75	0.93
Transmembrane Helix	76	97	0.92
Non-Cytoplasmic	98	115	0.83
Transmembrane Helix	116	134	0.83
Cytoplasmic	135	270	0.79
Transmembrane Helix	271	293	0.89
Non-Cytoplasmic	294	301	0.76
Transmembrane Helix	302	324	0.88
Cytoplasmic	325	332	0.91
Transmembrane Helix	333	353	0.92
Non-Cytoplasmic	354	355	0.87