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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG11874-PA
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDGGHITLT LPPGSAATTD ERGRKSLRRA WNQLPRCQRN LIILGITGFC VTVLLCLSGD  60
   61 QLLAASLKDV DTKAEVAAYQ MPLPNPHHHP GVDKDVPKDT AAVPVPADKR APRVEAVSDK 120
  121 FNELVAYGEA NSAENVARLP ETVAAEGLPQ ASAMAVALPP PDSNKEQDIG GIDILNNVEE 180
  181 PVAQDPAEPL SEGEQLEQAI KNPLTLGGVS FKEHLKKIKP ILAKGQHFHG ATNERQSAVV 240
  241 AAFKHSWAGY KKYAWGHDNL KPISQYSHEW FGLGLTIVDS LDTMYIMGLD DEFKEGRDWV 300
  301 EQSLRFDTKR DVNLFEVTIR VLGGLLSAYH LSGDTMFLAK AAELGNRLLP AFQSPSNIPY 360
  361 SDVNLGDLSA HSPKWSPDSS TSEVTTIQLE FRDLSRSTNI SIYEQVAHKV NEKVHDLEKN 420
  421 HGLVPIFINA NTGTFRNYAT ISLGARGDSY YEYLLKQWIQ TGRKDNDNLI LDYMQAVDGV 480
  481 LTQLMRRTPR EHWVYIGELI NGKDFKPKMD HLTCYLPGTL ILGHQNGMPD SHLILARDLL 540
  541 DTCYQTYMMN PTHLAAEISY FALTEKDDQD IYVKPNDAHN LLRPEFVESL YYFYSITGNR 600
  601 TYQDMGWKIF QAFETHAKVN AGYTSMGNVK NTQSTRLRDL MESFWMSETL KYFYLLFSDD 660
  661 RKEIDLEQWV FNSEGHPLPV YPLKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle