YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ssl2-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLAALLKT SLFLVLFLGS LFLLPVLYPS TTFPFEQYFI KPARDLNGTL ELNNHLNGAR  60
   61 KLWKDQIFGP ECLIVLEDKI YTGIHSGEVI RLNNEESVQP ITKIGQPCDY IFDDELCGYP 120
  121 VGLALDTQGN NLIVSDAYYG IWQVDLETKK KTVLVPAEQI LPGKGANRRA KLFNSLVISR 180
  181 QGDIFWTDSF SEDFVFAAFA NPSGRYDRVK KTNEVLLDEL SFANGLALSP SEDFIILAET 240
  241 TAMRLRRYYL KGSRAGESEV FVEGLPGCPD NLTADEEGIW VPLSVASDSQ NPNLFAVLAP 300
  301 YPRLRSFLAR LVALMRLPLR VLNHIYPNDI AARLFHSFND LVIRNAPKRS TVVRVDWNGN 360
  361 IVRSLHGFDR SASGISHVLE VKGHLYLGSP FNHYVAKVKL PEEGLKSVKG N

Type	Start	End	Confidence
Signal Peptide	1	29	0.91
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	411	0.99