YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AR-2-PA, FBpp0307766
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTTMLANI SLNATRNEEN ITSFFTDEEW LAINGTLPWI VGFFFGVIAI TGFFGNLLVI  60
   61 LVVVFNNNMR STTNLMIVNL AAADLMFVIL CIPFTATDYM VYYWPYGRFW CRSVQYLIVV 120
  121 TAFASIYTLV LMSIDRFLAV VHPIRSRMMR TENITLIAIV TLWIVVLVVS VPVAFTHDVV 180
  181 VDYDAKKNIT YGMCTFTTND FLGPRTYQVT FFISSYLLPL MIISGLYMRM IMRLWRQGTG 240
  241 VRMSKESQRG RKRVTRLVVV VVIAFASLWL PVQLILLLKS LDVIETNTLT KLVIQVTAQT 300
  301 LAYSSSCINP LLYAFLSENF RKAFYKAVNC SSRYQNYTSD LPPPRKTSCA RTSTTGL

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.97
Transmembrane Helix	40	65	0.90
Cytoplasmic	66	74	0.90
Transmembrane Helix	75	97	0.91
Non-Cytoplasmic	98	113	0.91
Transmembrane Helix	114	134	0.91
Cytoplasmic	135	153	0.86
Transmembrane Helix	154	175	0.94
Non-Cytoplasmic	176	208	0.96
Transmembrane Helix	209	232	0.87
Cytoplasmic	233	253	0.94
Transmembrane Helix	254	275	0.90
Non-Cytoplasmic	276	357	0.63