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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9990-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLISTISTDS AMAATNNDGG TQPNAVAAWG APANGPRNTQ AAVSVRHAFK AYGKKKNANQ  60
   61 VLNNLNMTVP KGTIYGLLGA SGCGKTTLLS CIVGRRYMDA GEIFVLGGKP GTRGSGVPGK 120
  121 RVGYMPQEIA LYGEFSIQET MMYFGWIFGM DTKEILERLQ FLLNFLDLPS EKRLVKNLSG 180
  181 GQQRRVSFAV ALMHDPELLI LDEPTVGVDP LLRQSIWNHL VHITKAGQKT VIITTHYIEE 240
  241 ARQAHTIGLM RSGHLLAEES PSVLLSIYKC ISLEEVFLKL SRIQSQKGDV THVNFSNNIS 300
  301 LHAMAFGSKM DKPSSSQEGG VVGLNFHQSK EVLINDSNGS IYTLNQEPYS PPPSRRNNNP 360
  361 NDEESCQDCY SNLCKITSKG KIRALLTKNM LRMWRNVGVM LFIFALPVMQ VILFCLAIGR 420
  421 DPQGLNLAIV NGEMNDTVRE NCYWEDGCHF KNLGCRYLSH LNTSVVKTYY EDLDDAKEAV 480
  481 RKGTAWGAVY ISENFTDAFI ARANLGRDSD DETIDSSEVK VWLDMSNQQI GVMLNRDIQL 540
  541 AFRDFAMGLL GQCGSNPKLG DVPIQFRDPI YGTMNPSFTD FVAPGVILTI VFFLAVALTS 600
  601 SALIIERTEG LLDRSWVAGV SPFEILFSHV ITQFVVMCGQ TTLVLIFMLV VFGVTNNGDL 660
  661 FWVIVLTLLQ GMCGMCFGFL ISSVCELERN AIQLALGSFY PTLLLSGVIW PIEGMPVVLR 720
  721 YISLCLPLTL ATSSLRSILT RGWAILESDV YIGYVSTLSW IVGFLVLTLL VLRAKRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle