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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9990-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKKEATLS QQQTQQPIMD LERIKRHFSW SDPSAIISTD SAMAATNNDG GTQPNAVAAW  60
   61 GAPANGPRNT QAAVSVRHAF KAYGKKKNAN QVLNNLNMTV PKGTIYGLLG ASGCGKTTLL 120
  121 SCIVGRRYMD AGEIFVLGGK PGTRGSGVPG KRVGYMPQEI ALYGEFSIQE TMMYFGWIFG 180
  181 MDTKEILERL QFLLNFLDLP SEKRLVKNLS GGQQRRVSFA VALMHDPELL ILDEPTVGVD 240
  241 PLLRQSIWNH LVHITKAGQK TVIITTHYIE EARQAHTIGL MRSGHLLAEE SPSVLLSIYK 300
  301 CISLEEVFLK LSRIQSQKGD VTHVNFSNNI SLHAMAFGSK MDKPSSSQEG GVVGLNFHQS 360
  361 KEVLINDSNG SIYTLNQEPY SPPPSRRNNN PNDEESCQDC YSNLCKITSK GKIRALLTKN 420
  421 MLRMWRNVGV MLFIFALPVM QVILFCLAIG RDPQGLNLAI VNGEMNDTVR ENCYWEDGCH 480
  481 FKNLGCRYLS HLNTSVVKTY YEDLDDAKEA VRKGTAWGAV YISENFTDAF IARANLGRDS 540
  541 DDETIDSSEV KVWLDMSNQQ IGVMLNRDIQ LAFRDFAMGL LGQCGSNPKL GDVPIQFRDP 600
  601 IYGTMNPSFT DFVAPGVILT IVFFLAVALT SSALIIERTE GLLDRSWVAG VSPFEILFSH 660
  661 VITQFVVMCG QTTLVLIFML VVFGVTNNGD LFWVIVLTLL QGMCGMCFGF LISSVCELER 720
  721 NAIQLALGSF YPTLLLSGVI WPIEGMPVVL RYISLCLPLT LATSSLRSIL TRGWAILESD 780
  781 VYIGYVSTLS WIVGFLVLTL LVLRAKRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle