YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24650804, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKEETPST GGAAPVATVA ASGSATTSYA NVVQNLETKK SGTSNTTTTT ARATVDNKEN  60
   61 QPNLKSFKSW SEEAAAAEAA GESPIVGSVS LAQTGEKRAA ASGGDNTAEN SSELDDNNDF 120
  121 VPVLSHHRRD RKKARKEKPR DQQPAGGRGD GQKPQQAGGR RVPGSSDTER KSVRPRAPRG 180
  181 GSPRKSAAGA AGAAGSNAGA VSSAVPGGPK VHKDRKDTSP SASIEGAGSS GNEAKSADGD 240
  241 QQAGEKGAAG AAPPPKRFIA APPPKVNAWK VSDQMIESLS D

Type	Start	End	Confidence
Signal Peptide	1	30	0.77
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	281	0.99