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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG5508-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTVLNFAQ RVAEISLLGG IEIASVALIV YYIFAKTRAP VIIASLFPNL NLSYRTSYLS  60
   61 KINTIRSDLL VTLRSSNEPK TQNSVAHGIG TQNMLELTPH SGQKPFKKLF DWGVLFPYVA 120
  121 QVVRSEKFEY RQVTEIVHND AVLKHAIKQA AEQTLREQRY AKNGHRLLTR SASGDQEAQE 180
  181 EEDEKRGISY QAILRKQEQR AISILKDMGS TLNNGLLAFT SWILYKLLPC FLSGVVTNTK 240
  241 QIEMLKTATE RSPGTPLIFV PLHRSHLDYI MVTWILTNND IRSPLVAAGN NLQIPVFGGL 300
  301 LRGLGAFFIK RKIDPVEGKK DVLYRAALHL YLTHALKQGH NVEFFIEGGR TRTGKPCMPK 360
  361 GGILSVIVNA FMDGSIPDAL LVPVSVNYER LVDGNFVREQ KGEKKIPESF GKAISGIWKA 420
  421 LKSNYGLMRI DFNEPYSIRE LVNSYNKIAR EDGNIAKVYK PSARVLQHNQ STSSLYGTDV 480
  481 VCEEHRNLIE SISRQVVFDC AAATSVMSTN ALAFLLLTRF RNGAEEQILS EALDDLRNSL 540
  541 SGCKDIGFSG ESSQIVAYAC DLLGSGLVTR SRDENGRLVI KAVNSVESFI ELAYYSNMLT 600
  601 PHFALSSILL TTFHSLLPET ENKKEAAVSR KKLIDTALEN CQIYRYEFIL NKPTQVLENL 660
  661 LYQQLDDLLI SGCVLTEKLH DDLPNGAEGR RLANVLAECL DEDGYEDVRD GEADEPKLLF 720
  721 ASETPSQQRY ICEVLAPFAW TYVTVAQSLQ ILHKNSMLES EFISFVINDL SSKVKRGSCI 780
  781 YAESISTDSV RNCLKLLEKW SVIEVCNQQG MRLISLNTLY EMSRESLNSI VKKIDAIVPK 840
  841 FNSGYFSVTP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle