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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23180017, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWICRITIYS LLLGLVSAQI CTVNVTRNIK GTAVNVQTRD CCKGYKKVRS SALRCLAQCK  60
   61 VNCGSGFCTK PNVCTCKKGY VNLNNDPSNR CVPYCKGCSR GTCQSPGRCI CSARHLLDKT 120
  121 TNNCIPQCAS GCPNGTCITP NNCSCNKGYK LNPTTQVCLP TCKDNCAAVN GFCAAPNRCE 180
  181 CNPGFIPKPK SKSFECQPKC KNGCSNGVCR APDKCECNKF YEKDIDGNCV PICENGCVNG 240
  241 NCTAPDVCQC LTGYTKIGHN VCLAVCPEGC QNGVCVAPNE CSCNAGYTKL EGVCTPVCKD 300
  301 GCVNGFCASP EKCSCNDGYE MDSENRCSPV CSGGCKNGFC VAPGKCSCDE GYIKGTGNSC 360
  361 KPICSKGCEN GFCDAPEKCS CNDGYEMDGE NRCSPVCSGG CKNGFCVAPG KCSCDEGYSK 420
  421 ETGNSCKPIC SKGCENGFCD APEKCSCNDG YEMDSENRCS PVCSGGCKNG FCVAPGKCSC 480
  481 DEGYSKETGN SCKPICSKGC ENGFCDAPEK CSCNDGYEMD GENRCSPVCS GGCKNGFCVA 540
  541 PEKCSCDEGY SKETGNSCKP ICSNGCENGF CDAPEKCSCN DGYEMDGENR CSPVCSGGCK 600
  601 NGFCVAPGKC SCDEGYSKET GNSCKPICSK GCENGFCDAP EKCSCNDGYE MDSENRCSPV 660
  661 CSGGCKNGFC IAPGKCSCDE GYSKETGNSC KPICSKGCEN GFCDAPEKCS CNDGYEMDSE 720
  721 NRCSPVCSGG CKNGFCVAPG KCSCDEGYSK ETGNSCKPIC SKGCENGFCE APEKCSCNDG 780
  781 YEMDGENRCS PVCSGGCKNG FCIAPGKCSC DEGYSRETGN SCKPICSKGY FCKCDDGYIF 840
  841 VEESKSCQLD KELLGDYSDC DKNCRNGTCV EGICTCSKQY KLHRNEDDNN LICLPICEPE 900
  901 CLNGLCEFPG SCVCWDGHEK SERHLKWVFI TIVSMAFILA IITTMLIIYI FRKRSYHVDK 960
  961 NEREFGVYFS PNKVDIIRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle