YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220951680
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELFFLAAL LVAGNALPIE ERINGENGWF VPQEDGTFQW MDKKDAKELL ENISPLEFRS  60
   61 NEVSFYLYTK QNPTEGQEIT ADASSIVASH FNKDHGTRFV IHGWKGKYTD SMNVDITKAW 120
  121 LSKGDFNVIV VNWARSQSVD YAMSVRAVPG AGTKVGEMIQ YMHENHDMSL ETLEVIGHSL 180
  181 GAHVAGYAGK QVGQKRVHTI VGLDPALPLF SYDNPDKRLS SEDAFYVESI QTNGGVKGFV 240
  241 KPIGKAAFYV SGGRKQPGCG VDLAGTCSHA RSVIYYAEAI TENSFGAIQC QDYQAALDNE 300
  301 CGSSFSSVRM AEDTNAYNVE GHFYVPVNSE APFGQTE

Type	Start	End	Confidence
Signal Peptide	1	18	0.95
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	337	0.99