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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24650471, gi|...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGCITKVRPP SKEKLFKRSS RIFPNLVFCI SAWICLMRPS FGSIIKDSVK CTEGSVAADI  60
   61 DDCASYFQCI DDETVHLNCA NGSYFEASNE ICVVDEFGVC PTSRRLCFDG DIFEDINDCM 120
  121 SYVKCIRGDL VRQRCPAGSN FNVISKNCQM SRTGSCASPK EICLEGELQV DSEDCAGYLE 180
  181 CLNGGLVKEK CPIGSYFEPI FKLCQLDENG VCSSSSSECT DGEVRVDPNN CAGYFNCENG 240
  241 RLITKTCPSG TYFEPTYKTC TVDLKGVCVE PPAKCTEGQL KIDPNNCAGY LKCIDGEFVE 300
  301 EKCPGGTYYD FKLETCLVDT EGVCVTIRKL CIEGLREKDP KDCAAYTQCI RGRVESVMCD 360
  361 SGRYFNVTQG ECLADLYEVC LKSRKEHFRI VEHHQYDEST TPNSYQQTES TDADFQSTDS 420
  421 ALQEVTSQNS CIFDLNGACV GQSTICTEGK KQRDINNCAG YLKCIDGEFV EEECPESTYY 480
  481 DSNLETCLVD NYGACVTSTS ICVEGIVEED PKDCAGYNQC VRGKVEPLKC AFGRYFNGTQ 540
  541 GECLIDLDEV CAKSSQVDYD RDLEQFQYSQ STSEYLLEYT NTDTTIADFS TESSNADFNR 600
  601 YTDSNSYTDT ESTTNDVPTS TEVSTFDLKT TDLSLQFTTL DGVDNLDINT GTCVYNNTLF 660
  661 IEGIREVNPQ DCAGYIECFG GVAKELKCDS GRYFNETQRN CSVDVDEICL KSDKTIVLDL 720
  721 QTTTESTPNF TTSVDPFAKC RDGQLRLDPK NCAGFLKCVD GELKEEMCPS GFFYNSTSSK 780
  781 CMVDIRATCV TNIKYCIEGV REEDPNNCAG YRQCIRGLVQ NLNCPLGQYF NVAERDCLMD 840
  841 VHKVCARTEE VYKSDEVQHN DTGPPMTKPD ESCIRDINGV CVDPLAKCRE GQHKLDPNNC 900
  901 AGYLKCQNGE LIEELCPNGF YYDFLMKICL VDRRGICVTN IQICDEGALE EDPHDCAGYR 960
  961 QCIDGQVENL KCPFGTYFNV PLRDCLIDVD EICVRPEYKY FEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle