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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG5521-PA
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTKKSHADV KKSTAKLQDS KKDSASRLRH LRMILDNVEL EESKCLFETN YSHVYFILYD  60
   61 TFIQAEANLK QKVHKAHREE LDGSLWLLEK ILCLLPELLA RRWQCHSLSR IMAKLLHLGN 120
  121 SPKLRREGVR YFLLWYQTLG ENAPGYVHAM YADLIPGLIV PQKGVVGPDT EFSASDFLTH 180
  181 PNMKADGGMA SVFHDNAFSH PVQSSEVVAL LPPSSSEKSA PPDPRDGLEV LLNSMVHTAA 240
  241 CLRWRDNRAQ KDHRAFAFLL QRFMDVFLPV FSPNFDVSCS IYNPRLDLPV MRSINKKEEV 300
  301 MASCVVVLIN WVSRFTHERL LSHRLDCTLH IEDVDQVRLH GYQQGLIVRD VLYVNRENIN 360
  361 FVHEVYRQAF LLNFTSKPQI EAIRTAIAVY RDWMTGETPP PFLLEPNDDP PPPSNAGGTP 420
  421 RSQRLRTPSY VGAIAGSKDQ LVVRAGRQNV LQVFVTNAAN VFLVNTANLN ICFPTRSRSY 480
  481 RSTPLEEQTE ICKKVLNVYR TMVMNTEMDT RTWEQLLMVL LQVTSIVLHQ NQHTLPSGTN 540
  541 KSATLGGILG SAIFQTLIVT WIRAHTKVPV NVLLWEKFLN VLQSLTHREE LIIEWNKTIQ 600
  601 TLTRVFSRYT YGINLLDLPL DRVAESRAEK RRRIGSVWQG SGSNSAANGG SAASAAISQN 660
  661 RQRESLAESS SSRSEETSSQ VPLPNHPRPH HQHTQSQGGT GHGTRPIPLT PMLSRSYSEG 720
  721 SLASAARSSR IRRRRAATPK PKALQPSQLA ENRINPQDLR RAMSLDSLAR KGDAEETDSY 780
  781 QEGDNESGAG SRSPSPTASS GIEGGSIKDA QLQIDASLDD ANSGSYGSGS NSGSISGRRC 840
  841 IILGGSAEGW HPDSTSIMWK RMLGALGDVN RIPKADLHAQ VFMHLLEMTQ NLIKIKQNQG 900
  901 ISTDNQNTQP MPPLVPPIGI VAPWCYGSLS LDRSFKKGKL WALQLLCSLA IQGAVNMQQL 960
  961 PLFYHALHQL LTGEDRDLIY AILKHLEGPR LLSLLLPGHT LLLLDLVHAS AILLTSLEVS1020
 1021 RSTPRAEVAA LLGSLLCYPS SLLTRSVLQP TPQKFELMEC SDLQDHILNI VLRCARREPS1080
 1081 AKARCIALSQ LGQWLLMRLS QPLPASNSGR ANLFQQAVPH HKDVHPKASS VYNPRIKEVL1140
 1141 QVLLQALQFK HHTIAIVAVD SLKLCAERGR QLAAIERVPQ LIITAICKAL EIQSVTKPKD1200
 1201 SDKVVLTSLM LCLGEFCMAI PAPIMLTPFN EQGDTLVLQV LRVLLQVASG APRHERVKLT1260
 1261 ADDDFDMHIA HDDLQGDGRL PEATYQTSET IQKCITAIKL CAKAVSMHLV THIGHFPMGI1320
 1321 GASRLSSMVE EQDDIGNAAY GGQVETRRDS VELPSVVSAQ NMQLFMLNSG LVASFIELPT1380
 1381 LKLPGGGITA GLVTADKQVR VLMRDLNGKA CWDASILYSE PRNAEEPPKT TPKIQHSQPL1440
 1441 DSMATSMVTH TPSPRHTLRH RPAGVLPLAK DMAPDLDQLD DMLAYIGHTS PECVAPTVSQ1500
 1501 LNAPTASPLS GNQEAQAISV ILNQRLLEQE FVTHSTQAPS PALRHASSNS SLQQPDQRSL1560
 1561 HSTTASFDSL PTRTEMPFQY CRLLFSHLGL AGWERRSRTH LLQRSEKLMR ELRNVDLQKC1620
 1621 RETHKMAVIY VAAGQEDKGS ILRNTSGSST YEMFVSALGW EIDLETHNGF LGGLPRQGCG1680
 1681 ATAPYYATPF LEVVYHVATR MPSDSSEAML LKTRHLGNDE VHIVWSEHNR DYRRDILPTE1740
 1741 FCDVLIVVYP LRNGLFRVTV NRKPEVPWFG PLANESVVSG ACLATLIRAT AINASRTKRA1800
 1801 ALPLYQQFYE ERNRSLDSVS SRYKESTTFE DFASRIYNPM PLSTLGTLRE SNASSSAAPL1860
 1861 ASALLDHNRA SVKGWVQASI DSGPIMGIAP SASAGSTAAM EAATGMSSAS PRGPRKLGAP1920
 1921 FKSVTKKHSL QHIAVGGGAG AGGDTPPESP TLPQRRFK

YRC Informatics Platform - Version 3.0
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