YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5948-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKLILALV IGYGGIFAPG SAQNLLDRLR PVNMTRFDDG IKVVSGTKVK RYERLTVPLG  60
   61 GPVGIPGAAG LLGPLLPPQP SYLGYTYQLV PQWQAGAKLM GDGEGAGVAG MISFVQLPYN 120
  121 SDIRVTINVT GLPPGKHALH IHTFGDLSDG CKSTGGQFPN NFLGNVDTKD DGSISAVFQS 180
  181 IYLQLFGING IVGRSIVIHS KAIDLNTALN AEVFSSSLQA MPNPLAYQNE ENSLGPAIAC 240
  241 GVISIMSTAA SSSGMATAAP APPAMENPEI

Type	Start	End	Confidence
Signal Peptide	1	22	0.92
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.93