YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG4774-PA, CG477...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAIIFRQV QRPLHHGAAT LEHVLGVGGS SFVNCLNRYA AATGFIRISF LDIKRRRNYE  60
   61 LARLRLYADE KKQSLHLRTL QGRHLLQGVI ERKNFLVDDI REARHKVQER VREKIDEIRE 120
  121 ERENIMTIPN MLTISRAVLS PYIGYVIVQG DFTLGMSLLA FAGITDLLDG QIARRWPSQA 180
  181 SKFGSFLDPM ADKLLMGSLV ISLCYTDLLP MWLMGIVVFR DVFLLGAGFV IRYISLPPPK 240
  241 TFSRYFDATH VTAQLEPTLL SKINTGVQLA TIGLSLGAPI WNYLDHPALQ GLWYLTGLTT 300
  301 AATALSYVMN RHNTFKIIQK KT

Type	Start	End	Confidence
Cytoplasmic	1	131	0.76
Transmembrane Helix	132	148	0.55
Non-Cytoplasmic	149	151	0.38
Transmembrane Helix	152	170	0.67
Cytoplasmic	171	189	0.48
Transmembrane Helix	190	209	0.58
Non-Cytoplasmic	210	215	0.49
Transmembrane Helix	216	236	0.80
Cytoplasmic	237	262	0.78
Transmembrane Helix	263	281	0.77
Non-Cytoplasmic	282	290	0.72
Transmembrane Helix	291	310	0.92
Cytoplasmic	311	322	0.92