YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG4582-PA
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMRMRNRGG KRLQANYFDT QMPLLSSGLM SPGQLPILDE QHGRQEQLER HYLAHGPSSV  60
   61 EQQLLRLQPD YKLLYSAEHH TYFHLHTLVP QDNANRQTGP LKSEKESPHR RLFQQVVGNT 120
  121 LTAAFGLNVM NKGDQEQNQQ FTSEPVNLYD AASLRRSRFS PFNPTRILIH GWLGNENANM 180
  181 YNELLPAYFD LRNGNYNIFT VDWGRGAIAD YITASYRVKP VGQVLAKFVD FLHQEAGMRF 240
  241 EDLQLVGFSM GAHVAGLAGK HLQTGRLRMI RALDPALPFF RYAKPKERLT AEDADYVEVL 300
  301 HTSVGSYGFD RPVGHVDFYA NWGSQQPGCF WHECSHWRAF MLFAESLARD QATGFLSQGC 360
  361 PAAEWQQLTR FHRCPKDTGV MQTMGGDLAN VSAEFLAQRQ GVYYFQTNDQ PPYVLAQNAS 420
  421 SKRAAHIQEN KK

Type	Start	End	Confidence
Cytoplasmic	1	16	0.60
Transmembrane Helix	17	38	0.54
Non-Cytoplasmic	39	432	0.98