YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11851-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	79	0.57
Transmembrane Helix	80	94	0.24
Non-Cytoplasmic	95	150	0.67
Transmembrane Helix	151	172	0.84
Cytoplasmic	173	187	0.86
Transmembrane Helix	188	208	0.91
Non-Cytoplasmic	209	228	0.79
Transmembrane Helix	229	254	0.87
Cytoplasmic	255	265	0.90
Transmembrane Helix	266	284	0.94
Non-Cytoplasmic	285	328	0.80
Transmembrane Helix	329	350	0.86
Cytoplasmic	351	358	0.81
Transmembrane Helix	359	379	0.91
Non-Cytoplasmic	380	386	0.76
Transmembrane Helix	387	409	0.86
Cytoplasmic	410	424	0.78
Transmembrane Helix	425	445	0.86
Non-Cytoplasmic	446	623	0.80

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPAARARY IANKADNQIL SKKPPKRPGL NGNNKTKEAT PAGKKKDKDA KKRNQPTSGG  60
   61 QEKGLPNPIM PSVQTAFKTF VSARLCSAIW AYIADCDETF NYWEPLHYII NGHGLQTWEY 120
  121 SPQFGLRSYT YLLLQGVPGY FYQKLFNPSP ILIFYMVRCM LGFGCAVMER YMYKSICQEF 180
  181 GIHIGRLWLI FQLFSVGMFV SSTALLPSSF SMYFGCAALA AWWQQNYCFA IFLTAISALL 240
  241 GWPFAALIGI PLVLEMLLRQ RDWKTFVQWT LISGATVAIP MIAIDTSYFG KLTFAPLNIV 300
  301 WYNVFTSHGP NIFGTEPLSY YIINGFLNFN IIWLLALQLP IMLVIDYLIV PAKSKSTLNF 360
  361 PHYISLAPLY LWLLVFFAQP HKEERFLFPI YPLISLCGAI TVDVYQRIFF RMKSVVFKIK 420
  421 AGVHYLDHSM FIAILVMVTS TLLGLSRVFA LYRNYHAPMD LMLELNQFKA TPQYDPDVIY 480
  481 NVCIGKDWHR YPGSFFFPAK NFRLRFLKSE FRGMLPAYYD EGQNATKVVQ PYFNDLNQEN 540
  541 EHMYFDYDRC DFLVDFDEGK YTALEPNYSK RSKDWSVMKS LPFLIPEKSH KVLRAFYVPF 600
  601 LTDNHIQYGD FNLLKRKTKR NGR