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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31121-PB, CG31...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSNFSSGK KMSREERRYS VPHGPNTPLP PAASEDLHAW SIYRQNLNSD FTDSALGSSD  60
   61 KSPLPYGNFQ LRDTTVQSIL NHPRYGPKSP LGSNMYTYLK FGLPRVFPPN AGSQRSHRPG 120
  121 PGPGAGPGHG HGGSSALGGV RGRVNRAFRD SSGAPAGAGS SGYDSSDNET TRSRVPPNLR 180
  181 KYRSESDFRA IGGMPHSRPE SRAQIGGGGV PMAALRQANS RASIAVGQHH HQMQQHQQQY 240
  241 GKHYGHRSHS EADLLGAGLS QVDGGGGGMG YDYNEARLYG SSRQYGNGNG HNPGSRKQSG 300
  301 MGLIYPNIQV HCLDVNPCLR GVSMQAKAGD LFAIMATSQR EGSALAECLA GLTERLGGEI 360
  361 LINGQQVSRR GLRELCSYVP ALEVSSLDPR MSVQCTLNFH AALRGPIDRS DLEERMDVLI 420
  421 EDLGLNTVRA SNVSTLTHSE KQRLSVACQL LAQSSLLILD QVTSNMDIFD TFFLVEYLRQ 480
  481 WCSGGRIVIM TLQPPTFEIL SMCSGVLLLS GGRTVFSGSR ADLPRHMGEL GYPCPPFKNP 540
  541 ADYYLDLVTL DDLSAAAMLE SSARIESLAN AWDQINSEPP LAAPPASLPN FTMKAGFFGQ 600
  601 ISALIKRFAG YKQPGSLLTW ISKLIAAAVL SLFIGCIFWD VPASDPQLSY HDRLGYHHCV 660
  661 MVLVYWPLVM LTIRDTQEDR RHAERDIRLG LYTRSLYIIV QSLLGLFPSL CIWLAYLLPA 720
  721 HSMAGLYTYS NSSDTGIYLY MGYMLLYLTL IQTLALFCAH LLPCKVSASI VNGLISLAVA 780
  781 AVGGYLVHPQ NLAQFWSWLQ FVSPERWLLP VLVQDEYSAE TLSNSAGLQL CRNKQVQHQE 840
  841 IIVQQPCPPP NGTQVLVDFE LLPQQHVLDP TPTYDQTTSV ALVLGSVLVF CVTFIVFLCN 900
  901 CRGACRRKRS R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle