YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0308362, CG5...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESSSSTKS RLAVAPTGVG GAAEGATYIR TIEWDMMNKT KFFPLSMLSS FSVRCCLFPL  60
   61 TVIKTQLQVQ HKSDVYKGMV DCAMKIYRSE GVPGLYRGFW ISSVQIVSGV FYISTYEGVR 120
  121 HVLNDLGAGH RMKALAGGGC ASLVGQTIIV PFDVISQHAM VLGMSAHAGS KGDINPLGIK 180
  181 SWPGRSRLHI SMDIGREIMR RDGFRGFYRG YTASLMAYVP NSAMWWAFYH LYQDELFRIC 240
  241 PVWVSHLFIQ CVAGSLGGFT TTILTNPLDI VRARLQVHRL DSMSVAFREL WQEEKLNCFF 300
  301 KGLSARLVQS AAFSFSIILG YETIKRIAVD EQYKHQIRW

Type	Start	End	Confidence
Cytoplasmic	1	93	0.64
Transmembrane Helix	94	115	0.78
Non-Cytoplasmic	116	133	0.71
Transmembrane Helix	134	155	0.76
Cytoplasmic	156	206	0.89
Transmembrane Helix	207	229	0.89
Non-Cytoplasmic	230	245	0.83
Transmembrane Helix	246	265	0.91
Cytoplasmic	266	339	0.85