YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5715-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSQNNTGS LLLLIILGIS LGDSMPLEDM DSQEMIDLTD LGDTLFGNPD VETTGALVEA  60
   61 LGVESPLNPE ELGTYHEGDI LIPLSYRDAR FNGTRNGILA LSSRWPGGVV PYEIKGPFTS 120
  121 QELGNINHAF KEYHTKTCVR FKPRTTEKDY ISIGSGKSGC WSSIGRLGGR QEVNLQSPNC 180
  181 LRTYGTPIHE LMHALGFFHE QNRHERDSYV RVMKDNIKPE MMVNFEKSSS RTQYGFGVEY 240
  241 DYGSVMHYSP TSFTRNGQPT LKALRATSDA SQMGQRKGFS AGDVRKINAM YKCKV

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	295	0.99