YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220958222, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLLLRGA VRCNAANLVK SARITPLKSY STLVANVQRK AVVQPLAVAK IVAPVVREIS  60
   61 VSAPRMASAG SSHTLLWTVE RIVSAGLLAV IPAAFIAPSQ VLDALMAISV VIHTHWGVEA 120
  121 MVVDYMRPSV VGNVLPKVAH IALIIISVAT LGGLFYFIQN DVGLANGIKR FWAIKGKDAE 180
  181 KA

Type	Start	End	Confidence
Cytoplasmic	1	76	0.95
Transmembrane Helix	77	111	0.68
Non-Cytoplasmic	112	137	0.53
Transmembrane Helix	138	159	0.92
Cytoplasmic	160	182	0.54