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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Irk2-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFNFSTHSA APTSTTIPTT TQANGGEQAT QPLKKAIEAD PDSLDSVISN PQSYPITIVP  60
   61 NRPTSYYGLS QNGKPFPRQP SCRSRNFRPG SMRRVRRRAV FKNGDCNVVQ KHLQRRRVRF 120
  121 LQDMYTTMVD WQWRWTLLAF ALSFILSWLF FALIWWLIIY THGDLEEPHL PENQEESGWA 180
  181 PCVSAIDGFT SCFLFSIETQ HTIGYGVRTT SPECPEAIFM MCFQSIYGVM SSAFMAGIVF 240
  241 AKMTRAKQRA QTLLFSKHAV ICQRDGTLSL MFRVGDMRKS HIIGAGVRAQ LIRTKSTKEG 300
  301 EVMTQYFTEL EIGTDDSGSD LFFIWPMVIE HKIDENSPLY NLNATDMLQD KFEIVVILEG 360
  361 TVESTGQSTQ ARSSYINTEI LWGHRFDPVV LYNKDLQAYE IDYARFNETT QVDTPLCSAR 420
  421 ELNEIYKIQE GFRTPETTFT MRQLSHNHSD QAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle