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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cenB1A-PA
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRATIEFEEC LKDSPRFRQF VSKEESDIEH LEQRLEKIIK LCNVAVDSGK EYVKNQSAFA  60
   61 MSLWDLQQHF LDNKNAHNAL GKLIHCFQEM NKFHTILLDQ ASRTVLKNLS VFVKDDINQV 120
  121 KDYKGHFLKV SEGYDNALIK NAQASKNRPQ EMQEAANILS ASKSCFQHTA LDYVNYITLA 180
  181 QARKVPSILS TLLDYYQACV TYYHQGFDLC NDFDEFFKNI SEDLNALRGD YQQLEKAMQN 240
  241 RHMSVNRYCD SNTNSTSNKI EGYLFKKKSK GFKTWCRRWF YLSDNQLVYR KRSNEDSFSV 300
  301 MEEDLRICSV RPVNEGDRRF CFEVISPTKS HILQADSADM LSLWISALQH SIGAAIQHDS 360
  361 THHSRPQSTN APNNSLPAKR RIHWEEFLKI PGNAYCCDCR SPEPRWASIN LGITLCIECS 420
  421 GVHRSLGVHY SKVRSLTLDA WESENVKVMM ELGNEVVNRI YEARIGDDCG LKKPTEQCEI 480
  481 GVREAWIKAK YVERRFVCGM PKPQELLASE TAEVLSIDSG GVVEDGESGG SGIAKRATLS 540
  541 LGGTRKWAVK KLRRRQKQRS IPKTLSDDPS IYNTAKTGDE LEDDDDDESI NIPSMSLSIS 600
  601 RDDLLVIGDD LALDRLETPG ILGSDQESTD GESDAESPEE LPFSQLDANQ LLYMASVVHN 660
  661 LPVMCMAFAL GADKMWKNPQ DRQRSFLHQA VISGSVMACE FLLLNGAAID AVDEMGYSAL 720
  721 HISTAKGHIA QVYLLLKHKA AYDLSSSDGK KALDIAVDQE NADIVTLLRL TQLNDEIGPN 780
  781 DEYNGEDETY KNVMKDFSKL PASQTRVLRQ RHDSNTLESQ RSSLTNSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle