YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG17119-PA, FBpp...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	126	0.99
Transmembrane Helix	127	148	0.90
Cytoplasmic	149	166	0.78
Transmembrane Helix	167	188	0.87
Non-Cytoplasmic	189	211	0.92
Transmembrane Helix	212	231	0.95
Cytoplasmic	232	239	0.89
Transmembrane Helix	240	261	0.94
Non-Cytoplasmic	262	268	0.71
Transmembrane Helix	269	288	0.85
Cytoplasmic	289	301	0.80
Transmembrane Helix	302	323	0.87
Non-Cytoplasmic	324	340	0.87
Transmembrane Helix	341	361	0.94
Cytoplasmic	362	397	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSTHRLTT LLLLLLATVA LGNAQSSQLT VDSHDITVLL NSNETFLVFA NGLLDSDVEV  60
   61 ALGTDSEDHL LLDPATFVYP AGSTRNQSVV ITGLKAGNVK VVADSDDANK EIVKDVFVRV 120
  121 TVAKSRALIY TSIIFGWVYF VAWSVSFYPQ IWSNYRRKSV EGLNFDFLAL NIVGFTLYSM 180
  181 FNCGLYFIED LQNEYEVRYP LGVNPVMLND VVFSLHAMFA TCITILQCFF YQRAQQRVSF 240
  241 IAYGILAIFA VVVVVSAGLA GGSVIHWLDF LYYCSYVKLT ITIIKYVPQA LMNYRRKSTS 300
  301 GWSIGNILLD FTGGTLSMLQ MILNAHNYDD WVSIFGDPTK FGLGLFSVLF DVFFMLQHYV 360
  361 FYRHSRESSS SDLTTVTDVQ NRTNESPPPS EVTTEKY