YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0301108
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	112	0.89
Transmembrane Helix	113	136	0.85
Non-Cytoplasmic	137	144	0.79
Transmembrane Helix	145	166	0.91
Cytoplasmic	167	171	0.71
Transmembrane Helix	172	189	0.83
Non-Cytoplasmic	190	196	0.71
Transmembrane Helix	197	217	0.83
Cytoplasmic	218	224	0.81
Transmembrane Helix	225	246	0.89
Non-Cytoplasmic	247	254	0.71
Transmembrane Helix	255	277	0.92
Cytoplasmic	278	292	0.91
Transmembrane Helix	293	317	0.86
Non-Cytoplasmic	318	325	0.79
Transmembrane Helix	326	347	0.88
Cytoplasmic	348	357	0.77
Transmembrane Helix	358	375	0.92
Non-Cytoplasmic	376	379	0.65
Transmembrane Helix	380	401	0.80
Cytoplasmic	402	451	0.75
Transmembrane Helix	452	472	0.90
Non-Cytoplasmic	473	523	0.67
Transmembrane Helix	524	548	0.87
Cytoplasmic	549	584	0.85

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQGAAPQDS QGDILPTRPL HTKLDIQKIP EDEAGADATQ NAATIILTPT SLNLTNTTTQ  60
   61 NVAANNAGNS STTTSTNTNY GPGSVSGYPT PNATPGDEYK GPKWWLYIRS HWVNTSELVA 120
  121 LLAIFLGLWA MGWVLLPEYS QPPTVIMRIA FLFVGAQISG ILVTFVHLPD MLGMLFFGVL 180
  181 YANLGLANFE GYQKFELFLR EMALINIMLL AGLGLDGDAF KRLWFMILRL TLLPTIVEVA 240
  241 AIAGLANLTL SMPWLWGIAL GLVITAVSPN VVVTVMLKLK EDRLGLNSGI HTLIYAMTTC 300
  301 NDVVAIFMFG VIISVIFSTT SLTQQVLQGP IGIGIGLVFG YLYGSMLQYL PSRNATYANG 360
  361 LRFVLTILGG TIAVMGSRVI GYTSAGALGC VTTAFIARIG WRREETRLTP QQLQAQQIAS 420
  421 VPKRLDLMWK FLKPVSFALI GKEINFNVLQ GHVIGYGALL VLVGSLFRLA FAYLSTYGGN 480
  481 LSRKERAYIT ISGFPKATVQ AALGPVALDM ARAASVASPE QLALAGNLLI ISVLAIIFTA 540
  541 PLGAILMLRL APYWLKHGDA VEAVDSPTTP IAPTLGSTNS SKGT