YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310735, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTTTIETI TITRPLKVIA FICGVIVVAL MIMALASTDW LMASDWRQGL FVHCIEDDSV  60
   61 PPLPFNIQDP PGCYWTRDVG YIKATAALCI ITLITDVIAT VLTGLGLRTQ NHNLKYKFYR 120
  121 IAVLVMLVSL LAVLSALIVY PVCFAGELTM ANRRVWEFGW AYGVGWGAAI FLFGAVVLLL 180
  181 CDKESEEIYY KERKIVHENQ MRA

Type	Start	End	Confidence
Cytoplasmic	1	17	0.94
Transmembrane Helix	18	38	0.93
Non-Cytoplasmic	39	83	0.94
Transmembrane Helix	84	106	0.93
Cytoplasmic	107	117	0.91
Transmembrane Helix	118	142	0.87
Non-Cytoplasmic	143	158	0.90
Transmembrane Helix	159	181	0.92
Cytoplasmic	182	203	0.98