YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0293863, CG5...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEVSQLLL AVVQGIPAGA TNDDLTKALP DVPAATRVEA LNILLQEGGI EILKKGEKLV  60
   61 YRAKDPEKKS ALPKDADNEE KVVYGIVEEG GNKGIWIRDI RMKSNLNMIQ LNKILKNLET 120
  121 KKLIKAVKSV NASKKKVYML YNLEPDLSIT GGAWYQDQDF EVEFVDVLNQ QCLRFLQMKR 180
  181 DSAEKKREGP LAFKQMSCCT VNEVQKFISD LGISKVNLAE ADLETILKTV VYDGNAERVR 240
  241 QQDGSFVYRA VNAPLPPTGL VQMPCGICPV IKNCSNCGDV TAITCEYMRD WLD

Type	Start	End	Confidence
Signal Peptide	1	20	0.81
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	293	0.99