YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300983, CG3...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.66
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPMICDLWS GRIWLLILIC LCGFQQSRCF FVDYTENTEL IQQRAGFDVK LQCNLKGLVD  60
   61 ESMLNDIKIH WYFKQCSENN CHQLGSVDEW TALPCEPSLC RPELWLRNVT ERYSGLYKCS 120
  121 INPHIWDKAQ AVDVQLVRTY QLDVKNTSLA APEFVDSYPN NKTTLVGSRV VFQCRVHSEE 180
  181 HPTIKWFRRQ TYVGTQSGGE ASSAPTTSNF SNHIVRYNGR TYELLSTDPE KMMAPQIYLS 240
  241 KLILDGVRLR DAGHYACVAI SYRGHKIREA FLDVLADVED TDQENEYWSD YGNEDEGVPT 300
  301 SDRREFLLLF LMPLGLALLP LTVWFSYLLY KRCSVGHGDC QRIDSDEDLD TERCVLGGNK 360
  361 H

Type	Start	End	Confidence
Signal Peptide	1	29	0.68
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	305	0.95
Transmembrane Helix	306	328	0.87
Cytoplasmic	329	361	0.89