YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	glec-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCPPMALGP FLAAPVPRPP PSASEKKRIC RNLFNNAPGD SNIDQLLAQE QHTQRLYVKE  60
   61 RYGYDIQLES NRDADANTDA DADTDAHCQV LRGMRYPTSR TISSTDADEC NPKAVSQAPR 120
  121 GMALTPAQIS ASAKLILQKC PESDRKKSNG SADLANCTRH GQKPYARQPQ GLKGMYNVRK 180
  181 TVNGISKPNV KNGYNNNNNS SSSNNNSNMN INNKIVDNGT SELADQKQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	228	0.99