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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31198-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAPRVAVLL VACVSLASAG TRQLSVDVQP PATLATELNE YRLAEHITPV NYNITLRPYL  60
   61 LETDGNKRFT FDGEVWIEVI SNQTTNDIYL HSKNLTYSVR EYWQKPTTEV ANPTVIQISA 120
  121 TNTTNYDTDI VKLTASTALT ANTTYILHFV YTGLMEDDMH GFYRSSYVDD NNVTKWLGST 180
  181 QFQTHHARRA FPSFDEPQFK ATFDVTLKRH RTFNSVSNTR LISSYPSTEE GIFSDVYKTT 240
  241 PKMSTYLLAF IISEFVARKD DDFGVYARPE YYAQTQYPYN VGIQILEEMG QYLDKDYYSM 300
  301 GNDKMDMAAI PDFSAGAMEN WGLLTYRERS LLVDESATTL ASRQSIAAVV AHEQAHMWFG 360
  361 DLVTCKWWSY TWLNEGFARY FQYFGTAMVE DKWELEKQFV VDQVQSVMAM DSTNATNPLS 420
  421 DENTYTPAHL SRMFNSISYN KGATFIRMIK HTMGEQQFQK SLQEYLKKYE YQSSLPEYLL 480
  481 GAWQANWPNS SYNESSKDIF KSFTEQVGYP LINVTVGNSQ VSFTQKRFLL KESDGSDSSL 540
  541 KYTVPISYTT SETNNFLNTT PKFILKPNVT TTVQFNSTIK WIVVNIQQTG YYRVTYSDDN 600
  601 WHAIHHALIT ANWGGIHENN RAQIVDDLFN LARAGYVTYN LTLDVIEYLQ TETNYIPWTS 660
  661 AFNGFNYLTI RLGNDTADFN YYIQTLTNKA YNQLGFNEAS NDTALDIYLR TKILSWACRY 720
  721 GSSDCISQAQ GYFQSLATVP KNIRATVYCV GLREGGEAEF QALYNKFKNE TVATEETLLQ 780
  781 NSFGCVKTQS LIEKVFDLII SDEIRRQDKS SVLATLYTEN NENVSPVFAL VTQKYEELAE 840
  841 AMGGYSAVAT VISNIAARFT TNQQLTDLEN FNKANGAKFG SSQATLTAAE ATVKENLEWA 900
  901 TAKLGVFRSY LANYRSGSAM VNAFSAISLL MVALVTMLRN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle