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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31343-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.71
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARWLLNSFS LILLLAVCSL QARLILPLSL DDGQLETKGA ALFATSRVDD NSAGNYRLPN  60
   61 TTEPESYNVE LWTNVHNGDT EFNGTVNIDI RVLNETSNIT LHYRQTSNFE ATIISRDVAT 120
  121 PTAIPLTVTP ELQREFLVLT QTTAGEAFGA NTNWTITINY TGIHRSDMGG FYISSYTDDD 180
  181 GEQHFLATTQ FESTNARHAF PCYDEPARRA NFTITIHHDP SYTAISNMPV NTAATSSGVT 240
  241 AFQTTPKMST YLVAFIVSDF ESTTGELNGI RQRVFSRKGK QDQQEWALWS GLLVESSLAS 300
  301 YFGVPFALPK LDQAGIPDFS AGAMENWGLA TYREQYMWWN KQNSTINLKT NIANIIGHEY 360
  361 AHMWFGDLVS IKWWTYLWLK EGFATLFSYE SNDIAFPLWD TYQIFHVNDY NSALLNDALA 420
  421 SAVPMTHYVQ TPSEISNRYN TFSYAKPASV LYMFKNAWTD KVFRTGLNKY LTKNQYTSCD 480
  481 EWDLFASFQE SADELGFTLP ASVDDIFSSW SHQAGYPLLT VTRNYNAGTI TITQKRYVAN 540
  541 KTDTNSATWY VPLNFATANK YDYRDTSATH YLLNVTETVI SDVEASSDDW IIVNIQNSGY 600
  601 YRTLYDTQNY GLITAALKSQ PWRFHPRNRA QLLYDTYIFV STDRLSHSIL LELLGYLTNE 660
  661 QQYAPWSTAN TILTVYDRYL RGDDSYYNFQ DFVKRLIDPI FDKIGVNEIP GEHYLNNYLR 720
  721 IVLVSLACQV GSDDCYNQSA NKLSEYLYNG TAIEATLKTQ AYCAGLRSTT NEIYSRVQSD 780
  781 LLSSSDSTDR SLFISSLGCS GSTSQLLDFL RLSLDTNNSL SYSERTSLLN SAYSRSEIGL 840
  841 TASLEFLESN WEAYANLSDS AKPLDAALRG IATYVVSEKQ KTRLNALVDV VEADGPSYIN 900
  901 DDLSTTIDSR ITSNFAWLEV NRDPVLNWIE DSLKENGSPS LTSSITTILV SAMALLLFRL 960
  961 Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle