YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310687, att...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLLEKPNI AMSIKSTGSQ LSSTMTTASA TLSSDLDDAD TSRTQLSPSE TSGVVLVPAT  60
   61 TVTPMRQKID QVVISLISGA AAGALAKTVI APLDRTKINF QIRNDVPFSF RASLRYLQNT 120
  121 YANEGVLALW RGNSATMARI VPYAAIQFTA HEQWRRILHV DKDGTNTKGR RFLAGSLAGI 180
  181 TSQSLTYPLD LARARMAVTD RYTGYRTLRQ VFTKIWVEEG PRTLFRGYWA TVLGVIPYAG 240
  241 TSFFTYETLK REYYEVVGNN KPNTLVSLAF GAAAGAAGQT ASYPLDIVRR RMQTMRVNTA 300
  301 GGDRYPTILE TLVKIYREEG VKNGFYKGLS MNWIKGPIAV GISFSTYDLI KAWLTELANL 360
  361 RRVEK

Type	Start	End	Confidence
Cytoplasmic	1	224	0.48
Transmembrane Helix	225	244	0.55
Non-Cytoplasmic	245	264	0.84
Transmembrane Helix	265	287	0.54
Cytoplasmic	288	365	0.52