YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG4323-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRRGGLMS YNQRRIARWY FGGLASSMAA MVTHPIDLIK VLIQTQAEKL SVFQTTRKIV  60
   61 KEQGPLAMYN GISASMLRQY TYTLARFGIY SVGSGAMDTS TMAGKTCLAA IAGGIGGFVG 120
  121 APADLINVRL QNDVKLPPEK RRNYKHAIDG LVRITREEGW KNLFNGSSMI ALRGAFMTVG 180
  181 QIAFYEQSKS QMIKLGMPDY MGTYILASMI SSVVATTLTQ PIDVVKTRRM NAAPGEYSGL 240
  241 GDVFVKTSKE GPLAFFKGYV PSLSRLLPHT VLLFLGLEYL RTHFGYLPEP KQTGAFYRYD 300
  301 DVDD

Type	Start	End	Confidence
Cytoplasmic	1	15	0.97
Transmembrane Helix	16	36	0.90
Non-Cytoplasmic	37	101	0.90
Transmembrane Helix	102	122	0.80
Cytoplasmic	123	162	0.81
Transmembrane Helix	163	184	0.80
Non-Cytoplasmic	185	200	0.85
Transmembrane Helix	201	222	0.81
Cytoplasmic	223	304	0.79