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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4562-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSMKADELP ENPREKSNIF SSLMFCFAMP TFFKGRKKTL DENDLYRALQ EHRSDHLGSK  60
   61 LSAAWEKEVE KKRKKKKTPS LLKASMNVFG WRLAGLGLVL FILEIGFRVT QPLFLGGLVA 120
  121 YYADASNQEG DNQTKAYLYA LGVILTSACN VLFMHPYMLG MFHIGMKARI AMTSMIYRKA 180
  181 LRLSRTALGD TTIGQVVNLI SNDVGRLDVS VIHMNYLWLG PVEIGIITYL MYREIGISAF 240
  241 FGVAVMLLFI PLQAYLGKKT SVLRLKTALR TDERVRMMNE IISGIQVIKM YAWEIPFSKM 300
  301 INYVRTKEMN AIRNVNYIRG TLQSFIMFVT RISVFVSLVG FVLLGKLLTA EKAFVITAYY 360
  361 NILRNTMTVY FPMGISQFAE LLVSIRRIQT FMLHEETKVR DKSEDLDEQK LGKAGLIAEP 420
  421 TVAQTTGVLK PSSRRTSEAE HSIVISKLKA KWDQKNTDNT LDNISLKFKP RQLVAVIGPV 480
  481 GSGKSSLIQA VLGELNPDSG SVKVNGTLSY ASQEPWLFTG TVRQNILFGL PMDKHRYRTV 540
  541 VKRCALERDF ELLPYADKTI VGERGASLSG GQKARISLAR AVYRKADIYL LDDPLSAVDT 600
  601 HVGRHLFDQC MRGFLREEIV LLVTHQLQFL EQADVIVIMD KGKISAMGTY ESMAKSGLDF 660
  661 AQMLTDPSKK DEGAGDAPDK KSLSRQNSKL RDRHGSISSM ESAAESLAAE SPMQTQEGRV 720
  721 EGRIGMKLYK KYFGANGYGL FIVFAFFCIG AQVLASGGDI FLSYWVNKNG EAERDTFMAR 780
  781 LRRAFPETRI NADTDPVDIY YFTGINVSVI IFSLVRSMLF FYLAMRSSTT LHNTMFQGVT 840
  841 RAAMHFFNTN PSGRILNRFS KDLGQVDEIL PSVMMDVMQI FLAIVGIVVV LCIINVWYIL 900
  901 ATVFLVIVFY LLRVFYLSTS RDVKRLEAVT RSPIYSHLSA SLNGLATIRA FGAQKELIAE 960
  961 FDNYQDMHSS GYYMFLATSR AFGYWLDCVC VVYIAVITLS FFLFSPENGG DVGLAITQAM1020
 1021 GMTGMVQWGM RQSAELENTM TAVERVVEYE DLEPEGDFES KPNKKPPKDW PEDGKIVFDD1080
 1081 LSLKYFPDKA ADYVLRSLNI AIEGCEKVGI VGRTGAGKSS LINALFRLSY NEGAILIDRR1140
 1141 DTNDLGLHDL RSKISIIPQE PVLFSGTMRY NLDPFDEYSD AKLWESLEEV KLKQVVADLP1200
 1201 SGLQSKISEG GTNFSVGQRQ LVCLARAILR ENRILVMDEA TANVDPQTDA LIQTTIRNKF1260
 1261 KDCTVLTIAH RLHTVMDSDK VLVMDAGKAV EFGSPFELLT TSEKKVFHSM VKQTGDSTFD1320
 1321 ALLKVAQKVG LRFKIQCNLS TCLSSLSSFQ AHDDNLRLKK DS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle