YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0293287, CG7...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	16	0.94
Transmembrane Helix	17	38	0.89
Non-Cytoplasmic	39	106	0.96
Transmembrane Helix	107	128	0.90
Cytoplasmic	129	134	0.78
Transmembrane Helix	135	155	0.89
Non-Cytoplasmic	156	161	0.75
Transmembrane Helix	162	183	0.90
Cytoplasmic	184	193	0.82
Transmembrane Helix	194	215	0.95
Non-Cytoplasmic	216	222	0.78
Transmembrane Helix	223	242	0.95
Cytoplasmic	243	310	0.96
Transmembrane Helix	311	329	0.91
Non-Cytoplasmic	330	336	0.81
Transmembrane Helix	337	360	0.90
Cytoplasmic	361	369	0.89
Transmembrane Helix	370	391	0.93
Non-Cytoplasmic	392	398	0.77
Transmembrane Helix	399	420	0.72
Cytoplasmic	421	435	0.64
Transmembrane Helix	436	455	0.92
Non-Cytoplasmic	456	462	0.65
Transmembrane Helix	463	483	0.89
Cytoplasmic	484	540	0.79

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVDKILEK CGDFSRLQMI MLLLFCVINV LSALHYYSQT IISFVPKYWC ADGLPASIES  60
   61 PVDSSCLPLN RNISTPNTCY SYNYELYMGY QSFPSEMDWV CADAWKLTLG QSMFFVGSVV 120
  121 GSMVLGYLAD VVGRLPILIV ANLIAMTGNL LTIWSTNVTL FCMFRMISGI ATDSNFVMMY 180
  181 ILVMEYMRPS VRTLGLSICI GFFYCLGSMA APWIAVLMRS WRGFLLTTSL PLLVVPFFYL 240
  241 IVPESIQWLI SKQKYDSAVV CLKRVAKING RHVEESAYAE FIEECKCSQQ NQKASPHLLD 300
  301 LFQTPRLRRH TLILFFKSMV ITLCYDAVSR NVQGLGISPF VMFSLSATAI LPACLLIIAL 360
  361 QDRIGRKAMA SASLLLSGIF ISVTGGIIFA ASASDKTTTL LVSLSVVGRF GVTVAYNSGA 420
  421 QYATELIPTC VRGQGVAAVH VAGYAFTFFS AYILFTRSVF SPLPEIILGV LSLLGACLCL 480
  481 LLPETLHRTL PTSLEDGENF GKNDRWYTFS FLEGRTQSAA TLDTQNAKMY SQSTESAVYF 540
  541