YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG31221-PA, CG31...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLAMDHHH HHHHQQPRQH HLSMWPSFAV CLLLLQTTTT TMAIDLSRLY GHMANPIVKR  60
   61 SEACHPYEPF KCPGDGNCIS IQYLCDGAPD CSDGYDEDMR LCTAAKRPPV EETASFLQSL 120
  121 IASHGPNYLE KLFGSKARDA LSPLGGVEKV AIALSESQTI EDFGAALHLM RSDLEHLRSV 180
  181 FMAVENGDLG MLKSLGIKDS ELGDVKFFLE KLVNTGFLD

Type	Start	End	Confidence
Cytoplasmic	1	20	0.38
Transmembrane Helix	21	44	0.48
Non-Cytoplasmic	45	219	0.83