YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5250-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNDAIIYSG PYELGRLRRR RDMRVAEYLY RRSIRTRNAD PEMTVCRFIK LLLYFIGFFF  60
   61 VLGVFTTGLA LVMIANHIYP DRPGCKKFPG LATAPGHHVG DQKQIMWSPN NIKDVANIQR 120
  121 AIMRTVKRYG LEGPKRLMGC NIDDSWGYMS GTPCILIKIT QALGFQAVTY DDALTLPEYA 180
  181 PDELFDYVVG LGSEERFNRI WVSCQVIEPR VDIQFDYHPV RFFDAEELFT SGNVFLNESS 240
  241 DDDGPTYKED PRLRRIISVR LSNIPINEDI QIHCKAWAKN IPLHMVTVKM LVRLTAPVHP 300
  301 TTPLVLDEWY E

Type	Start	End	Confidence
Cytoplasmic	1	50	0.93
Transmembrane Helix	51	74	0.91
Non-Cytoplasmic	75	311	0.92