YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11703-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEDVMVPAG DYKLVKQIRR NQETRRKKDL PWSKRIFDID EHKLFGRTAL GWMRITGFYL  60
   61 VLYALIVCIV AFWLGIFMLA IIDPNKPRWL KGPPGLSMVP NQNRSVLAYF THIMSEVNPI 120
  121 ADRIDDFLNK LNDNAIDFFA DFNQDTTWGY ATEKPTVFIK LNKVIGYVPE TYDTPDDLPK 180
  181 EAPASLQDTV GKLGNTPKIW ITCEVTNGPK PEMVFYPGPY FEASENMRGV TRVVAIQMNK 240
  241 MPENAKTFFS CKVWARNIPI DDDYQGMGII KFALSMRTDD DGNPDFERPS TRKAPREIDL 300
  301 ESEELVPEPP SPNRPESMLG GLELPPPPED EKDALDAMGN DAKKEEMTEP PSL

Type	Start	End	Confidence
Cytoplasmic	1	56	0.83
Transmembrane Helix	57	81	0.90
Non-Cytoplasmic	82	353	0.84