YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG31229-PA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLPNAGNN ESSVTAPKMF GDPDLDRMAM EYVGNMQRYR ENIIIPKSNG PVKIKTNEEK  60
   61 FIETAVESCG FKCTMACVMG YGLGAALGLF SASVNPNMAD PFANEKKQTA REVFREMRST 120
  121 THSYAKNFAL IGCVFSAVEC TIESHRGVTD WKNGTYAGGI TGGLIGLRAG VKAGIIGGLG 180
  181 FAAFSTAIDY YMYSR

Type	Start	End	Confidence
Cytoplasmic	1	69	0.95
Transmembrane Helix	70	92	0.67
Non-Cytoplasmic	93	168	0.69
Transmembrane Helix	169	193	0.79
Cytoplasmic	194	195	0.71