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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cpsf73-PA
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQATGDARM PDEESDLLQI KPLGAGQEVG RSCIMLEFKG KKIMLDCGIH PGLSGMDALP  60
   61 YVDLIEADEI DLLFISHFHL DHCGALPWFL MKTSFKGRCF MTHATKAIYR WMLSDYIKIS 120
  121 NISTEQMLYT EADLEASMEK IETINFHEER DVMGVRFCAY IAGHVLGAAM FMIEIAGIKI 180
  181 LYTGDFSRQE DRHLMAAEVP PMKPDVLITE STYGTHIHEK REDRENRFTS LVQKIVQQGG 240
  241 RCLIPVFALG RAQELLLILD EFWSQNPDLH EIPIYYASSL AKKCMAVYQT YINAMNDRIR 300
  301 RQIAVNNPFV FRHISNLKGI DHFEDIGPCV IMASPGMMQS GLSRELFESW CTDPKNGVII 360
  361 AGYCVEGTLA KAVLSEPEEI TTLSGQKLPL NMSVDYISFS AHTDYQQTSE FIRLLKPTHV 420
  421 VLVHGEQNEM SRLKLALQRE YEADASTDIK FYNPRNTHAV DLYFRGEKTA KVMGSLAAKN 480
  481 SEVGSKLSGV LVKRDFKYHL LAPSDLGKYT DMSMSVVTQR QSIPWGSSLS TLELLLDRIG 540
  541 AGCVEVLEAE RKLRVFGCIE LTVEQKIIVM EWQATHVNDV YADAVLACIM QSELGGTNLK 600
  601 GATKQTKSED SRFRECLIET LQDTFGDNCV PKMFEGDLLP VTVSGKRAEI NLETLAISCA 660
  661 EDDVLRQMLN TTVQKLHQTL VSAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle