YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7675-PB, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIFGWLST EHYVRDIFLM TSVAAIVATL MSIRFYLRIT AGRCFTETKM EGKTVIITGA  60
   61 NSGIGKETAK DLAGRGARII MACRNLETAN AVKDEIVKET KNNKILVKKL DLGSQKSVRE 120
  121 FAADIVKTEP KIDVLIHNAG MALAFRGQTS EDGVELTMAT NHYGPFLLTH LLIDVLKKSA 180
  181 PARIVIVASE LYRLSSVNLA KLNPIGTFPA AYLYYVSKFA NIYFARELAK RLEGTKVTVN 240
  241 FLHPGMIDSG IWRNVPFPLN LPMMAITKGF FKTTKAGAQT TIYLATSNEV ANVSGKYFMD 300
  301 CKEATLNAAA LDEEKGLKIW EESVKIVKLT PQDPKI

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.64
Transmembrane Helix	17	37	0.89
Cytoplasmic	38	336	0.64