YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG18012-PA
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVLPKKRN ACVIVLGDIG RSPRMQYHAQ SLLEENYHVD MIGYLETRPL EELTQHPRCR  60
   61 IHELTAVPVT NLTPKLRLLF KAFWQTLSLL MALISIGRPS FLLVQNPPGI PTLIVCYLYC 120
  121 AVTRTKLAID WHNYTYTVLA LGMSKGEQSP LIRLVRRLER YFGSKAHTHF CVTRAMQEDL 180
  181 QQNWGIGPVK VLYDRAPAQF HPIDLTHKHE LYLKLAKDYP QFQAKDAEQS DVLEATALTQ 240
  241 KLASGVVQYR PQRQAVLVSS TSWTPDEDFG ILLKALQAYE ETAQAEPLVY PSLLCIITGK 300
  301 GPQKEHYVAE IEKLQWQKVS VITPWLEIED YPTVLASADL GVCLHWSTSG LDLPMKVVDM 360
  361 FGSGLPVCAY DFKCLDELVK HGENGFVFGD HVQLAEQLRI WFENFPKNPS ILETRAGFQR 420
  421 KIQEFQELRW RESWRLIAAP VLEAFL

Type	Start	End	Confidence
Cytoplasmic	1	81	0.78
Transmembrane Helix	82	102	0.70
Non-Cytoplasmic	103	446	0.92