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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pxt-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILFILLL LIVTQLSELQ AAAFSVRQNR FDEVPDLQTP APLATSTESS KKPEKATSGL  60
   61 LKKCLPCSDG IRCVPQIQCP AHVRMESHEK PQICDLPAGK FGYCCETGQN HTAPKPETSP 120
  121 KERRSGFPTI LSPAVLDEAR RNFEHLMHGV AQIPVRRGFP DFAHGLVFHS TAKDDLHNFA 180
  181 ISNSAIEQVM TTQLFGKKEQ VPVEDFITNN VPIKFTETPL AHHCQPPPVC GNIRSVYRSM 240
  241 DGTCNNPEPQ RSLWGAAGQP MERMLPPAYE DGIWTPRAHS SDGTPLLGAR KISRTLLSDV 300
  301 DRPHPKYNLM VMQFGQVLAH DISQTSSIRL EDGSLVQCCS PEGKVALSPQ QSHFACMPIH 360
  361 VEPDDEFFSA FGVRCLNFVR LSLVPSPDCQ LSYGKQLTKV THFVDASPVY GSSDEASRSL 420
  421 RAFRGGRLRM MNDFGRDLLP LTNDKKACPS EEAGKSCFHS GDGRTNQIIS LITLQILLAR 480
  481 EHNRVAGALH ELNPSASDET LFQEARRIVI AEMQHITYNE FLPIIIGPQQ MKRFRLVPLH 540
  541 QGYSHDYNVN VNPAITNEFS GAAYRMGHSS VDGKFQIRQE HGRIDEVVNI PDVMFNPSRM 600
  601 RKREFYDDML RTLYSQPMQQ VDSSISQGLS RFLFRGDNPF GLDLAAINIQ RGRDQGLRSY 660
  661 NDYLELMGAP KLHSFEQFPI EIAQKLSRVY RTPDDIDLWV GGLLEKAVEG GVVGVTFAEI 720
  721 IADQFARFKQ GDRYYYEYDN GINPGAFNPL QLQEIRKVTL ARLLCDNSDR LTLQAVPLAA 780
  781 FVRADHPGNQ MIGCDDPNLP SVNLEAWRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle